Overview Annotation GWAS Evidence Associated genes

P03790

Metabolite ID
P03790
Deionized mass
149.0474 Da
Average m/z
150.0540
Average RT
7.8504
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G173500 hypothetical protein AT2G36850:GSL8:glucan synthase-like 8 2Chr06:14595971–14646811 (+)2.383e-11
Glyma.17G191900 hypothetical protein AT1G58350:ZW18:Putative serine esterase family protein 2Chr17:27318916–27345167 (+)9.969e-13
Glyma.17G201700 hypothetical protein NA 2Chr17:32074587–32087831 (+)7.285e-11
Glyma.06G173400 hypothetical protein NA 1Chr06:14583960–14595832 (+)2.383e-11
Glyma.06G174000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr06:14684775–14701032 (-)2.383e-11
Glyma.08G309600 hypothetical protein NA 1Chr08:42888266–42892461 (-)1.557e-11
Glyma.14G085400 hypothetical protein AT4G06744:AT4G06744:Leucine-rich repeat (LRR) family protein 1Chr14:7547143–7548736 (-)2.397e-18
Glyma.15G006400 hypothetical protein AT4G02580:AT4G02580:NADH-ubiquinone oxidoreductase 24 kDa subunit 1Chr15:546560–550831 (-)1.842e-11
Glyma.17G180100 hypothetical protein NA 1Chr17:20207825–20213274 (-)9.969e-13
Glyma.17G183000 hypothetical protein NA 1Chr17:22704215–22704630 (+)9.969e-13
Glyma.17G183400 hypothetical protein AT1G29940:NRPA2:nuclear RNA polymerase A2 1Chr17:22979338–23008830 (-)9.969e-13
Glyma.17G187400 hypothetical protein AT5G35910:AT5G35910:Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein 1Chr17:24004203–24015486 (-)9.969e-13
Glyma.17G188000 hypothetical protein AT5G17920:ATMS1:Cobalamin-independent synthase family protein 1Chr17:24337467–24340754 (+)9.969e-13
Glyma.17G188300 hypothetical protein AT5G24810:AT5G24810:ABC1 family protein 1Chr17:24446976–24471715 (+)9.969e-13
Glyma.17G188700 hypothetical protein NA 1Chr17:24919859–24928912 (+)9.969e-13
Glyma.17G189100 hypothetical protein NA 1Chr17:25520831–25530780 (+)9.969e-13
Glyma.17G189500 hypothetical protein AT4G31410:AT4G31410:E3 ubiquitin-protein ligase, putative (DUF1644) 1Chr17:25967900–25972936 (-)9.969e-13
Glyma.17G189600 hypothetical protein AT4G31420:AT4G31420:Zinc finger protein 622 1Chr17:25987993–25991250 (+)9.969e-13
Glyma.17G190500 hypothetical protein AT4G32720:La1:La protein 1 1Chr17:26714122–26722963 (+)9.969e-13
Glyma.17G190900 hypothetical protein AT4G32730:PC-MYB1:Homeodomain-like protein 1Chr17:26889187–26896879 (-)9.969e-13
Glyma.17G191000 hypothetical protein AT3G08790:AT3G08790:ENTH/VHS/GAT family protein 1Chr17:27068347–27087869 (+)9.969e-13
Glyma.17G191500 hypothetical protein AT5G05240:AT5G05240:cation-transporting ATPase 1Chr17:27282728–27296651 (+)9.969e-13
Glyma.17G191700 hypothetical protein NA 1Chr17:27297763–27300248 (+)9.969e-13
Glyma.17G192500 hypothetical protein NA 1Chr17:27698521–27710693 (-)9.969e-13
Glyma.17G192700 hypothetical protein AT5G11640:AT5G11640:Thioredoxin superfamily protein 1Chr17:27915622–27928405 (-)9.969e-13
Glyma.17G193500 hypothetical protein NA 1Chr17:28314469–28316219 (+)9.969e-13
Glyma.17G193800 Nuclear pore complex protein NUP85 AT4G32910:AT4G32910:nuclear pore complex Nup85-like protein 1Chr17:28893388–28907055 (+)9.969e-13
Glyma.17G195000 hypothetical protein NA 1Chr17:29973262–29976000 (+)9.969e-13
Glyma.17G196400 hypothetical protein NA 1Chr17:30693822–30727304 (-)9.969e-13
Glyma.17G197300 hypothetical protein NA 1Chr17:31101245–31106617 (-)9.969e-13
Glyma.17G197900 hypothetical protein NA 1Chr17:31297891–31307775 (+)9.969e-13
Glyma.17G199200 hypothetical protein NA 1Chr17:31565684–31575131 (-)9.969e-13
Glyma.17G199400 hypothetical protein NA 1Chr17:31585092–31585542 (+)9.969e-13
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 1Chr17:31731965–31738073 (+)9.969e-13
Glyma.17G200200 hypothetical protein AT4G31420:AT4G31420:Zinc finger protein 622 1Chr17:31840273–31843479 (+)9.969e-13
Glyma.17G201100 hypothetical protein AT4G31080:AT4G31080:integral membrane metal-binding family protein (DUF2296) 1Chr17:31972369–31980500 (-)9.969e-13
Glyma.17G201600 Probable plastid-lipid-associated protein 8, chloroplastic AT5G19940:AT5G19940:Plastid-lipid associated protein PAP / fibrillin family protein 1Chr17:32063468–32067772 (+)7.285e-11
Glyma.17G201800 hypothetical protein NA 1Chr17:32090425–32093099 (+)7.285e-11
Glyma.17G202300 hypothetical protein AT4G31390:ACDO1:Protein kinase superfamily protein 1Chr17:32202067–32211495 (+)7.285e-11
Glyma.17G202500 hypothetical protein AT4G31140:AT4G31140:O-Glycosyl hydrolases family 17 protein 1Chr17:32240216–32245810 (+)7.285e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)7.285e-11
Glyma.18G027000 hypothetical protein AT5G05660:NFXL2:NF-X1-type zinc finger protein NFXL2 1Chr18:2024473–2032910 (-)3.091e-11
Glyma.18G027100 hypothetical protein AT3G55940:AT3G55940:Phosphoinositide-specific phospholipase C family protein 1Chr18:2033839–2038697 (-)3.091e-11
Glyma.18G027200 hypothetical protein NA 1Chr18:2042578–2048191 (-)3.091e-11
Glyma.18G027300 hypothetical protein NA 1Chr18:2049280–2053959 (-)3.091e-11
Glyma.18G027400 CYP25 peptidyl-prolyl cis-trans isomerase CYP25 NA 1Chr18:2060386–2063284 (+)3.091e-11