Overview Annotation GWAS Evidence Associated genes

P03678

Metabolite ID
P03678
Deionized mass
385.1233 Da
Average m/z
386.1296
Average RT
7.7891
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.236e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.949e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.987e-16
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.194e-15
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.447e-15
Glyma.09G068500 PHD6 PHD finger protein GmPHD6 AT5G20510:AL5:alfin-like 5 1Chr09:6937814–6941687 (+)1.129e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.616e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.616e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.892e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)8.699e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)8.699e-11
Glyma.16G208700 hypothetical protein AT5G26360:AT5G26360:TCP-1/cpn60 chaperonin family protein 1Chr16:36814752–36820289 (-)1.26e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.394e-11
Glyma.18G247000 hypothetical protein NA 1Chr18:53433846–53444848 (-)1.272e-11
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)2.613e-11