Overview Annotation GWAS Evidence Associated genes

P03472

Metabolite ID
P03472
Deionized mass
139.0977 Da
Average m/z
140.1057
Average RT
7.6551
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.161e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.683e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.955e-13
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 1Chr06:48253149–48265560 (+)6.696e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)9.178e-11
Glyma.08G200200 hypothetical protein NA 1Chr08:16187816–16191151 (+)2.773e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.584e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)4.505e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.505e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.227e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.817e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)4.891e-11
Glyma.20G021600 PT12 AT1G20860:PHT1;8:phosphate transporter 1;8__AT1G76430:PHT1;9:phosphate transporter 1;9 1Chr20:2196534–2205616 (+)4.845e-11