Overview Annotation GWAS Evidence Associated genes

P03453

Metabolite ID
P03453
Deionized mass
315.0815 Da
Average m/z
316.0879
Average RT
7.6432
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G045600 hypothetical protein NA 1Chr02:4195911–4203265 (+)2.166e-11
Glyma.02G045900 hypothetical protein AT4G35930:FBS4:F-box family protein 1Chr02:4221436–4224148 (+)2.166e-11
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 1Chr02:4276605–4283705 (-)2.166e-11
Glyma.02G046900 hypothetical protein AT4G38630:RPN10:regulatory particle non-ATPase 10 1Chr02:4314354–4319916 (-)2.166e-11
Glyma.02G047800 hypothetical protein AT5G07090:AT5G07090:Ribosomal protein S4 (RPS4A) family protein 1Chr02:4396176–4398689 (-)2.166e-11
Glyma.04G015900 hypothetical protein AT1G42970:GAPB:glyceraldehyde-3-phosphate dehydrogenase B subunit 1Chr04:1205398–1209005 (+)4.049e-11
Glyma.04G016500 hypothetical protein AT1G20780:SAUL1:senescence-associated E3 ubiquitin ligase 1 1Chr04:1244329–1249253 (-)4.049e-11
Glyma.04G016600 hypothetical protein AT1G20760:AT1G20760:Calcium-binding EF hand family protein 1Chr04:1250315–1260822 (-)4.049e-11
Glyma.05G211800 hypothetical protein AT1G63980:AT1G63980:D111/G-patch domain-containing protein 1Chr05:39327490–39330903 (+)6.209e-13
Glyma.05G211900 hypothetical protein AT4G23550:WRKY29:WRKY family transcription factor 1Chr05:39339316–39341188 (+)6.209e-13
Glyma.05G215500 hypothetical protein AT4G23800:3xHMG-box2:HMG (high mobility group) box protein 1Chr05:39615259–39617763 (+)6.209e-13
Glyma.08G071300 hypothetical protein AT5G64260:EXL2:EXORDIUM like 2 1Chr08:5453068–5455249 (-)8.618e-12
Glyma.14G022500 hypothetical protein NA 1Chr14:1594167–1598135 (-)3.429e-11
Glyma.16G206600 hypothetical protein NA 1Chr16:36680202–36681939 (+)7.69e-11