Overview Annotation GWAS Evidence Associated genes

P03425

Metabolite ID
P03425
Deionized mass
238.0930 Da
Average m/z
239.1006
Average RT
7.6130
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
8
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

8 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G074200 hypothetical protein AT3G24170:GR1:glutathione-disulfide reductase 2Chr02:6473402–6488550 (-)3.442e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.41e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.858e-12
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.858e-12
Glyma.06G307900 hypothetical protein NA 1Chr06:49664901–49674729 (+)1.597e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.979e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)6.596e-11
Glyma.15G261600 hypothetical protein AT1G16280:RH36:RNA helicase 36 1Chr15:49391698–49397734 (-)7.296e-11