P03388
Metabolite ID
P03388
Deionized mass
269.0955 Da
Average m/z
270.1052
Average RT
7.5508
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
91
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
91 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 4 | Chr13:31727841–31735910 (-) | 1.043e-13 | |
| Glyma.16G209300 | hypothetical protein | NA | 4 | Chr16:36856833–36863994 (-) | 1.359e-12 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.912e-12 | |
| Glyma.13G224800 | hypothetical protein | NA | 3 | Chr13:33748627–33756494 (-) | 1.287e-11 | |
| Glyma.09G277300 | hypothetical protein | NA | 2 | Chr09:49271634–49276648 (-) | 2.808e-11 | |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 2 | Chr13:31720004–31725252 (+) | 1.043e-13 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 2 | Chr16:26324650–26336836 (+) | 7.578e-12 | |
| Glyma.16G196900 | hypothetical protein | NA | 2 | Chr16:35841279–35846894 (-) | 6.468e-12 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.912e-12 | |
| Glyma.01G119600 | SLE3 | AT2G40170:GEA6:Stress induced protein | 1 | Chr01:41172520–41174209 (-) | 4.866e-11 | |
| Glyma.01G121400 | hypothetical protein | AT5G01400:ESP4:HEAT repeat-containing protein | 1 | Chr01:41808055–41828625 (-) | 5.243e-12 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 3.152e-11 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 9.529e-14 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 6.923e-13 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 6.923e-13 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 3.799e-11 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 4.366e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 1.028e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 4.779e-12 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 3.486e-13 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 3.699e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 3.057e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 3.057e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.125e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 7.717e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 7.717e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 7.717e-13 | |
| Glyma.05G149900 | hypothetical protein | NA | 1 | Chr05:34389242–34393621 (-) | 9.213e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.147e-11 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 6.341e-18 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 6.622e-14 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 9.692e-12 | |
| Glyma.06G316500 | hypothetical protein | AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein | 1 | Chr06:50531222–50538652 (-) | 3.001e-11 | |
| Glyma.06G324300 | GmCSyGT1 | NA | 1 | Chr06:51189321–51193954 (-) | 1.181e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.257e-11 | |
| Glyma.08G142200 | hypothetical protein | NA | 1 | Chr08:10833827–10834390 (-) | 4.641e-11 | |
| Glyma.08G142400 | WRKY6 | WRKY transcription factor 6 | NA | 1 | Chr08:10843433–10846761 (-) | 4.641e-11 |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 9.201e-13 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 4.55e-12 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 5.958e-12 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 7.801e-13 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 1.805e-15 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 5.285e-13 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 5.285e-13 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 5.285e-13 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 5.285e-13 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 8.237e-12 | |
| Glyma.11G049700 | hypothetical protein | NA | 1 | Chr11:3731308–3734534 (+) | 2.237e-11 | |
| Glyma.11G050300 | hypothetical protein | AT2G23093:AT2G23093:Major facilitator superfamily protein | 1 | Chr11:3765453–3771565 (+) | 1.765e-11 | |
| Glyma.11G050500 | hypothetical protein | AT5G67370:CGLD27:DUF1230 family protein (DUF1230) | 1 | Chr11:3778152–3782174 (+) | 1.765e-11 | |
| Glyma.11G050600 | hypothetical protein | NA | 1 | Chr11:3779988–3786583 (-) | 1.765e-11 | |
| Glyma.11G051600 | hypothetical protein | NA | 1 | Chr11:3857225–3859564 (-) | 1.765e-11 | |
| Glyma.12G001400 | hypothetical protein | AT1G72090:AT1G72090:Methylthiotransferase | 1 | Chr12:113763–118480 (+) | 5.724e-11 | |
| Glyma.12G001600 | PM27 | seed maturation protein PM27 | AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… | 1 | Chr12:127545–128932 (+) | 5.724e-11 |
| Glyma.12G001700 | hypothetical protein | AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein | 1 | Chr12:132389–134935 (+) | 5.724e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 4.045e-14 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 4.045e-14 | |
| Glyma.12G198700 | hypothetical protein | AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein | 1 | Chr12:36001658–36004086 (+) | 8.015e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 1.203e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 1.203e-11 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 4.984e-11 | |
| Glyma.13G081100 | hypothetical protein | NA | 1 | Chr13:18881427–18886462 (-) | 2.315e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 1.439e-14 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 1.228e-11 | |
| Glyma.13G203600 | hypothetical protein | AT5G13490:AAC2:ADP/ATP carrier 2 | 1 | Chr13:31753843–31756013 (-) | 9.447e-12 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 1.043e-13 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 1.076e-14 | |
| Glyma.13G224300 | hypothetical protein | NA | 1 | Chr13:33703380–33715996 (-) | 1.287e-11 | |
| Glyma.13G224500 | hypothetical protein | AT1G29750:RKF1:receptor-like kinase in flowers 1 | 1 | Chr13:33725180–33735368 (+) | 5.096e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.492e-13 | |
| Glyma.15G150300 | hypothetical protein | AT5G49130:AT5G49130:MATE efflux family protein | 1 | Chr15:12416065–12418420 (-) | 8.028e-11 | |
| Glyma.15G150400 | hypothetical protein | AT3G06840:AT3G06840:uncharacterized protein | 1 | Chr15:12436393–12437800 (-) | 4.556e-11 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 1.499e-11 | |
| Glyma.16G116200 | hypothetical protein | AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr16:25892277–25904773 (+) | 1.477e-11 | |
| Glyma.16G189000 | hypothetical protein | NA | 1 | Chr16:35160485–35167548 (-) | 2.944e-11 | |
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr16:35831912–35835153 (+) | 5.534e-11 | |
| Glyma.16G207900 | hypothetical protein | AT5G08450:AT5G08450:zinc finger CCCH domain protein | 1 | Chr16:36754888–36763450 (+) | 2.131e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 3.237e-12 | |
| Glyma.18G111800 | hypothetical protein | AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein | 1 | Chr18:13278653–13284970 (+) | 1.2e-12 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 5.968e-12 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 4.466e-11 | |
| Glyma.18G266200 | hypothetical protein | NA | 1 | Chr18:55065716–55066843 (-) | 2.117e-12 | |
| Glyma.18G266400 | hypothetical protein | AT3G29390:RIK:RS2-interacting KH protein | 1 | Chr18:55076548–55086297 (+) | 6.703e-11 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 1.708e-11 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 4.3e-12 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 4.959e-11 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 4.959e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 6.966e-12 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 6.966e-12 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 3.135e-11 | |
| Glyma.20G110000 | hypothetical protein | AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 | 1 | Chr20:35229423–35231861 (+) | 5.76e-11 |