Overview Annotation GWAS Evidence Associated genes

P03254

Metabolite ID
P03254
Deionized mass
144.0409 Da
Average m/z
145.0482
Average RT
7.1984
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)1.141e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)1.141e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.141e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)2.512e-15
Glyma.12G049500 hypothetical protein AT2G43560:AT2G43560:FKBP-like peptidyl-prolyl cis-trans isomerase family protein 1Chr12:3547790–3551313 (+)4.038e-11
Glyma.12G050200 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr12:3600553–3604637 (-)4.038e-11