Overview Annotation GWAS Evidence Associated genes

P02984

Metabolite ID
P02984
Deionized mass
240.1099 Da
Average m/z
241.1184
Average RT
6.2567
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.442e-20
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.371e-11
Glyma.08G200200 hypothetical protein NA 1Chr08:16187816–16191151 (+)4.701e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.689e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.689e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.689e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.689e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.499e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.769e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.391e-11
Glyma.19G110800 hypothetical protein NA 1Chr19:36458960–36463094 (-)9.94e-12
Glyma.19G110900 hypothetical protein AT3G03920:AT3G03920:H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 1Chr19:36511164–36513544 (+)9.94e-12
Glyma.19G111000 hypothetical protein AT3G03910:GDH3:glutamate dehydrogenase 3 1Chr19:36534479–36539096 (-)9.94e-12