Overview Annotation GWAS Evidence Associated genes

P02940

Metabolite ID
P02940
Deionized mass
287.1934 Da
Average m/z
288.2008
Average RT
6.1311
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)2.241e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.97e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.909e-16
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.14e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.567e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.048e-11
Glyma.10G079900 hypothetical protein AT3G11650:NHL2:NDR1/HIN1-like 2 1Chr10:9245085–9246282 (-)6.048e-11
Glyma.10G080100 hypothetical protein AT2G44860:AT2G44860:Ribosomal protein L24e family protein 1Chr10:9295934–9296863 (-)6.048e-11
Glyma.10G080200 hypothetical protein NA 1Chr10:9350912–9352018 (+)6.048e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)1.498e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.048e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)1.498e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.97e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.223e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.223e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.223e-13
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)8.244e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.381e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.727e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.727e-11