Overview Annotation GWAS Evidence Associated genes

P02934

Metabolite ID
P02934
Deionized mass
377.1254 Da
Average m/z
378.1302
Average RT
6.1123
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G137700 hypothetical protein AT3G59660:AT3G59660:C2 domain-containing protein / GRAM domain-containing protein 2Chr02:14232594–14257011 (-)1.832e-12
Glyma.01G020100 hypothetical protein NA 1Chr01:1999880–2008419 (+)5.48e-14
Glyma.01G020500 hypothetical protein AT4G37940:AGL21:AGAMOUS-like 21 1Chr01:2039275–2056055 (-)5.48e-14
Glyma.01G021000 hypothetical protein NA 1Chr01:2122589–2125447 (+)5.48e-14
Glyma.02G137400 hypothetical protein AT1G05710:AT1G05710:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr02:14214097–14219443 (+)1.832e-12
Glyma.02G137600 hypothetical protein AT1G05720:AT1G05720:selenoprotein family protein 1Chr02:14228005–14231025 (-)1.832e-12
Glyma.02G137800 hypothetical protein AT3G59670:AT3G59670:elongation factor 1Chr02:14259785–14264648 (+)1.832e-12
Glyma.07G127800 hypothetical protein NA 1Chr07:15282079–15287161 (-)2.472e-12
Glyma.07G128200 hypothetical protein AT4G29520:AT4G29520:nucleophosmin 1Chr07:15334250–15337922 (-)3.723e-11
Glyma.07G128400 hypothetical protein AT5G56750:NDL1:N-MYC downregulated-like 1 1Chr07:15342246–15346164 (-)3.723e-11
Glyma.07G128600 hypothetical protein NA 1Chr07:15350391–15352293 (-)3.723e-11
Glyma.07G129400 hypothetical protein AT3G02370:AT3G02370:tRNA-splicing endonuclease subunit__AT3G57360:AT3G57360:tRNA-splicing endonuclease subunit 1Chr07:15397826–15401368 (-)3.723e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)3.723e-11