Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P02604

Metabolite ID
P02604
Deionized mass
361.0783 Da
Average m/z
362.0844
Average RT
5.4478
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)9.286e-17
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)3.508e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.278e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)8.711e-14
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.648e-15
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.5e-19
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)6.838e-18
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)1.01e-18
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)1.01e-18
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)1.01e-18
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)1.01e-18
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)1.01e-18
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)1.01e-18
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)1.01e-18
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)9.286e-17
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)6.686e-15
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 1Chr03:2202325–2234931 (+)2.315e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.159e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.343e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.355e-11
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 1Chr08:11083230–11086950 (-)9.898e-12
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 1Chr08:11092669–11096142 (-)9.898e-12
Glyma.08G146000 hypothetical protein AT5G09850:AT5G09850:Transcription elongation factor (TFIIS) family protein 1Chr08:11103557–11106499 (+)7.814e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)5.46e-12
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)3.672e-13
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)3.804e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)5.787e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)5.392e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.204e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.688e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.395e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.395e-12
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)2.523e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.755e-16
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.196e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)7.461e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.027e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.278e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)8.711e-14
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)5.433e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.439e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.439e-13
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.656e-11