Overview Annotation GWAS Evidence Associated genes

P02576

Metabolite ID
P02576
Deionized mass
463.2017 Da
Average m/z
464.2089
Average RT
5.4029
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)6.08e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)2.887e-12
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)7.92e-12
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)2.184e-12
Glyma.15G141200 hypothetical protein AT3G17000:UBC32:ubiquitin-conjugating enzyme 32 2Chr15:11557041–11559982 (-)5.478e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)3.513e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.555e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.834e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.27e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.27e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)6.08e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)6.08e-11
Glyma.07G078000 hypothetical protein NA 1Chr07:7121636–7126695 (+)3.338e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)6.961e-11
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)3.565e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.795e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.417e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.417e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.417e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.417e-11
Glyma.15G140500 hypothetical protein NA 1Chr15:11496139–11502209 (-)6.115e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.137e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.428e-13
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.451e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.32e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.965e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.966e-11