Overview Annotation GWAS Evidence Associated genes

P02414

Metabolite ID
P02414
Deionized mass
292.0055 Da
Average m/z
293.0098
Average RT
5.2232
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G124200 hypothetical protein AT4G20790:AT4G20790:Leucine-rich repeat protein kinase family protein 1Chr05:31776906–31778608 (-)4.135e-11
Glyma.05G124400 hypothetical protein NA 1Chr05:31780682–31781501 (+)4.136e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.205e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.92e-11
Glyma.11G067800 hypothetical protein NA 1Chr11:5093882–5100937 (+)4.128e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.262e-11
Glyma.15G037600 hypothetical protein AT2G29050:RBL1:RHOMBOID-like 1 1Chr15:2964304–2967785 (+)7.898e-11
Glyma.16G094100 hypothetical protein AT5G44670:GALS2:glycosyltransferase family protein (DUF23) 1Chr16:15765396–15769218 (+)1.993e-13
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 1Chr16:16911412–16924907 (-)1.993e-13
Glyma.16G095300 hypothetical protein NA 1Chr16:16915253–16919205 (+)1.993e-13
Glyma.16G096300 hypothetical protein NA 1Chr16:18249261–18250367 (-)1.993e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.428e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)2.645e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.972e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.364e-11