Overview Annotation GWAS Evidence Associated genes

P02405

Metabolite ID
P02405
Deionized mass
261.0820 Da
Average m/z
262.0896
Average RT
5.2179
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 2Chr11:11117760–11123162 (+)7.421e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.059e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.059e-13
Glyma.01G170700 hypothetical protein NA 1Chr01:50793927–50800725 (-)7.589e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)3.066e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)1.354e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)3.534e-12
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 1Chr11:11096950–11105343 (+)7.421e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.402e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.402e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.468e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.468e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.059e-13
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.017e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.309e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.309e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.729e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.734e-13
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.779e-12