Overview Annotation GWAS Evidence Associated genes

P02254

Metabolite ID
P02254
Deionized mass
273.9992 Da
Average m/z
275.0055
Average RT
5.0299
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G192600 hypothetical protein AT1G29940:NRPA2:nuclear RNA polymerase A2 3Chr13:30592072–30619011 (+)4.076e-17
Glyma.05G138100 hypothetical protein AT2G01900:AT2G01900:DNAse I-like superfamily protein 1Chr05:33054280–33058277 (-)2.821e-12
Glyma.07G225900 hypothetical protein NA 1Chr07:40293074–40294617 (+)1.371e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)3.856e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)4.369e-15
Glyma.09G256700 hypothetical protein AT5G28350:AT5G28350:Quinoprotein amine dehydrogenase, beta chain-like; RIC1-like guanyl-nucleotide exchange factor 1Chr09:47570343–47583508 (-)9.452e-12
Glyma.13G193700 hypothetical protein AT3G12250:TGA6:TGACG motif-binding factor 6 1Chr13:30682181–30695761 (-)1.455e-11
Glyma.18G095300 hypothetical protein NA 1Chr18:9740941–9744176 (-)9.371e-12
Glyma.18G095600 hypothetical protein NA 1Chr18:9810199–9814709 (+)9.371e-12
Glyma.18G175200 hypothetical protein NA 1Chr18:41481433–41484199 (-)4.296e-11
Glyma.18G175300 hypothetical protein AT5G48900:AT5G48900:Pectin lyase-like superfamily protein__AT3G07010:AT3G07010:Pectin lyase-like superfamily protein 1Chr18:41509717–41516615 (+)4.297e-11