Overview Annotation GWAS Evidence Associated genes

P02160

Metabolite ID
P02160
Deionized mass
114.0313 Da
Average m/z
115.0381
Average RT
4.9723
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G189600 hypothetical protein AT3G50080:VFB2:VIER F-box protein 2__AT5G67250:SKIP2:SKP1/ASK1-interacting protein 2 2Chr01:52461366–52463442 (-)1.997e-14
Glyma.01G189800 hypothetical protein NA 2Chr01:52471826–52474286 (-)1.368e-11
Glyma.01G190000 hypothetical protein AT5G67270:EB1C:end binding protein 1C 2Chr01:52475965–52478086 (-)1.368e-11
Glyma.01G013200 hypothetical protein AT4G16070:AT4G16070:lipase class 3 family protein 1Chr01:1245513–1250153 (-)8.861e-15
Glyma.01G189200 hypothetical protein AT4G36890:IRX14:Nucleotide-diphospho-sugar transferases superfamily protein 1Chr01:52433139–52437026 (+)1.997e-14
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)8.861e-15
Glyma.02G088500 hypothetical protein AT5G16180:CRS1:maize chloroplast splicing factor-like protein 1Chr02:7782734–7786619 (+)8.861e-15
Glyma.10G139200 hypothetical protein AT3G62060:AT3G62060:Pectinacetylesterase family protein 1Chr10:37299583–37309070 (-)6.15e-13
Glyma.10G139300 hypothetical protein AT4G01660:ABC1:ABC transporter 1 1Chr10:37310023–37316796 (-)6.15e-13
Glyma.10G140900 hypothetical protein AT5G26742:emb1138:DEAD box RNA helicase (RH3) 1Chr10:37421265–37427610 (-)2.215e-11
Glyma.13G361500 hypothetical protein AT1G80360:AT1G80360:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 1Chr13:44836262–44841707 (+)2.234e-11
Glyma.20G246200 hypothetical protein AT2G43330:INT1:inositol transporter 1 1Chr20:47637362–47643056 (-)9.31e-13