Overview Annotation GWAS Evidence Associated genes

P01962

Metabolite ID
P01962
Deionized mass
142.0254 Da
Average m/z
143.0329
Average RT
4.6774
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G107200 hypothetical protein NA 2Chr02:10212071–10224981 (-)1.99e-11
Glyma.16G038200 hypothetical protein NA 2Chr16:3593536–3595987 (+)6.609e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.197e-12
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)8.953e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.261e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.849e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.849e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.849e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.849e-12
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 1Chr15:49447943–49451741 (+)4.478e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)9.064e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)9.064e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)3.493e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)7.689e-18
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.338e-11