Overview Annotation GWAS Evidence Associated genes

P01839

Metabolite ID
P01839
Deionized mass
101.0474 Da
Average m/z
102.0542
Average RT
4.4053
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G177100 hypothetical protein NA 1Chr12:33576567–33582476 (-)1.72e-12
Glyma.20G023400 hypothetical protein NA 1Chr20:2494327–2499290 (+)8.335e-11
Glyma.20G023800 hypothetical protein NA 1Chr20:2547520–2554268 (-)8.335e-11
Glyma.20G025100 hypothetical protein AT2G32080:PUR ALPHA-1:purin-rich alpha 1 1Chr20:2714404–2724177 (+)3.59e-14
Glyma.20G025500 hypothetical protein AT1G69250:AT1G69250:Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-conta… 1Chr20:2788607–2793211 (+)3.59e-14