Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01744

Metabolite ID
P01744
Deionized mass
466.1603 Da
Average m/z
467.1704
Average RT
4.2922
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)4.132e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)6.675e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)4.841e-14
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 2Chr03:2240686–2246512 (-)9.816e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 2Chr14:5675792–5680343 (+)3.358e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.057e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)3.929e-12
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)4.082e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.981e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)8.904e-13
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.355e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.155e-13
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)6.675e-14
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)6.675e-14
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)2.266e-13
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)2.266e-13
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)2.085e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)3.339e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.755e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)1.589e-13
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)3.428e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)6.401e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)1.453e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.564e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.564e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.008e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.466e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)1.322e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.061e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.061e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.061e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.488e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)6.721e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.47e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.556e-12
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)5.669e-12
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)5.669e-12
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)5.669e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)3.802e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.005e-11
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)2.499e-13
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)3.922e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.755e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.841e-14
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.452e-12
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)8.958e-11
Glyma.18G251400 hypothetical protein NA 1Chr18:53754942–53759244 (-)3.625e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.192e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)6.282e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.514e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.514e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.055e-12