Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01703

Metabolite ID
P01703
Deionized mass
183.0505 Da
Average m/z
184.0587
Average RT
4.2517
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
61
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

61 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.434e-12
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)1.081e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.482e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.308e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.308e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)1.775e-11
Glyma.20G152300 hypothetical protein NA 2Chr20:39117272–39119456 (+)2.03e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.029e-11
Glyma.03G007800 hypothetical protein AT4G26010:AT4G26010:Peroxidase superfamily protein 1Chr03:758088–760465 (-)9.439e-12
Glyma.03G007900 hypothetical protein NA 1Chr03:764330–766878 (-)8.596e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.004e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.342e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.543e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.719e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.521e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)2.126e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)2.126e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)2.126e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)2.126e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)2.126e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)2.126e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)2.126e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)2.126e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)2.126e-11
Glyma.06G211400 hypothetical protein AT5G22950:VPS24.1:SNF7 family protein 1Chr06:21093799–21101088 (+)6.11e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)2.126e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.94e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)6.668e-12
Glyma.11G018000 hypothetical protein AT4G11040:AT4G11040:Protein phosphatase 2C family protein 1Chr11:1246178–1247949 (+)4.104e-11
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)1.598e-11
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)1.598e-11
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)1.598e-11
Glyma.12G002400 hypothetical protein AT5G47850:CCR4:CRINKLY4 related 4 1Chr12:197288–200229 (+)7.216e-11
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)1.741e-12
Glyma.12G003900 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 1Chr12:302437–304546 (+)3.135e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.964e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.964e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.635e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.635e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.39e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.172e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.321e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.321e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)2.38e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.875e-14
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.769e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.769e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.308e-12
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)7.015e-12
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)5.81e-11
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 1Chr18:6873417–6878947 (-)1.631e-12
Glyma.18G195000 hypothetical protein NA 1Chr18:46858462–46861415 (+)7.636e-11
Glyma.18G195500 hypothetical protein NA 1Chr18:46967195–46981775 (+)2.011e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.892e-13
Glyma.20G146400 hypothetical protein NA 1Chr20:38481091–38481770 (+)4.466e-11
Glyma.20G146600 hypothetical protein NA 1Chr20:38489665–38507273 (-)4.466e-11
Glyma.20G149900 hypothetical protein NA 1Chr20:38879682–38881629 (-)3.134e-13
Glyma.20G150300 hypothetical protein AT3G22830:HSFA6B:heat shock transcription factor A6B 1Chr20:38922066–38924621 (+)3.604e-12
Glyma.20G150500 hypothetical protein AT1G04200:AT1G04200:dyggve-melchior-clausen syndrome protein 1Chr20:38931470–38938465 (+)3.604e-12
Glyma.20G150900 hypothetical protein AT3G22850:AT3G22850:aluminum induced protein with YGL and LRDR motifs 1Chr20:38964427–38974019 (+)2.13e-11
Glyma.20G152400 hypothetical protein NA 1Chr20:39120600–39123107 (-)5.762e-11