Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01700

Metabolite ID
P01700
Deionized mass
154.0429 Da
Average m/z
155.0506
Average RT
4.2473
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.084e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 3Chr16:30652378–30659548 (+)1.097e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.727e-12
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)3.637e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 2Chr06:49315918–49324382 (+)7.208e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.45e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.45e-11
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)1.172e-14
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)2.176e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)3.637e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.641e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)9.128e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)8.373e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.52e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.002e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.708e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.708e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.708e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.708e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)4.663e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.084e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.084e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.085e-13
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)6.273e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)6.273e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.315e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.199e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.199e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.199e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.199e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.667e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.667e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.827e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.827e-13
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.982e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.45e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.45e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.695e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.359e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)5.611e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)2.705e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.812e-18
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.097e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.33e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)8.749e-13
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)4.881e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)6.506e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.011e-12
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)9.326e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.875e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.431e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.216e-11