Overview Annotation GWAS Evidence Associated genes

P01513

Metabolite ID
P01513
Deionized mass
420.9902 Da
Average m/z
421.9977
Average RT
4.0595
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
31
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

31 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)3.538e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)8.319e-13
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.018e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.154e-14
Glyma.16G210200 hypothetical protein NA 2Chr16:36933402–36938940 (+)4.86e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.385e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)6.152e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)3.976e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.987e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.213e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.728e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)4.492e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)4.492e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)4.492e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)4.563e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)8.319e-13
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)8.689e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)9.932e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.405e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)9.85e-11
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 1Chr12:35879106–35881779 (+)9.275e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)7.2e-13
Glyma.14G198600 hypothetical protein NA 1Chr14:46360801–46362778 (+)4.318e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)1.224e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.224e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)9.619e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.945e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.074e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)2.548e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.699e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.699e-11