Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01395

Metabolite ID
P01395
Deionized mass
331.1249 Da
Average m/z
332.1324
Average RT
3.9475
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 6Chr16:36856833–36863994 (-)1.309e-14
Glyma.07G018100 hypothetical protein NA 2Chr07:1442368–1445430 (-)2.199e-17
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)5.26e-11
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)3.158e-16
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)3.247e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)9.165e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.676e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.676e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)1.954e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.107e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.386e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.599e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.751e-12
Glyma.07G016700 hypothetical protein NA 1Chr07:1343519–1350422 (-)4.645e-12
Glyma.07G017300 hypothetical protein NA 1Chr07:1397047–1398526 (-)4.645e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)4.645e-12
Glyma.07G018200 hypothetical protein AT1G05385:LPA19:photosystem II 11 kDa protein-like protein 1Chr07:1455309–1457197 (-)4.645e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)2.199e-17
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)6.102e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)2.945e-13
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)1.056e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)3.387e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.395e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.395e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.395e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.395e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.93e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.141e-12
Glyma.10G211400 hypothetical protein AT1G48850:EMB1144:chorismate synthase, putative / 5-enolpyruvylshikimate-3-phosphate phospholyase 1Chr10:44391876–44402240 (-)7.417e-11
Glyma.10G271200 hypothetical protein AT1G25390:AT1G25390:Protein kinase superfamily protein 1Chr10:49343319–49353861 (+)5.944e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.247e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.292e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)9.165e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.834e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.834e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.676e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)3.349e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)6.467e-15
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.53e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.103e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.103e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)6.148e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)7.158e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.304e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)2.423e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)3.278e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)5.842e-13
Glyma.17G041000 hypothetical protein AT3G06950:AT3G06950:Pseudouridine synthase family protein 1Chr17:3025531–3029224 (+)7.694e-11
Glyma.17G041200 hypothetical protein NA 1Chr17:3041792–3047638 (+)7.694e-11
Glyma.17G041300 hypothetical protein NA 1Chr17:3066546–3073337 (+)7.694e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)8.606e-11
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45312584–45322950 (-)2.398e-11