Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01377

Metabolite ID
P01377
Deionized mass
205.9873 Da
Average m/z
206.9941
Average RT
3.9407
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
37
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

37 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G161500 hypothetical protein NA 4Chr16:32076715–32092322 (-)1.756e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)3.527e-12
Glyma.11G000200 hypothetical protein AT1G76670:AT1G76670:Nucleotide-sugar transporter family protein__AT5G42420:AT5G42420:Nucleotide-sugar transporter famil… 2Chr11:7666–11455 (+)6.36e-12
Glyma.02G120300 hypothetical protein AT1G69200:FLN2:fructokinase-like protein 1Chr02:11862175–11866155 (-)8.518e-11
Glyma.02G120600 hypothetical protein AT1G31690:AT1G31690:Copper amine oxidase family protein 1Chr02:11889104–11895861 (+)9.891e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.105e-11
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)1.352e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.446e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.123e-21
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.727e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.04e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.04e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.244e-15
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)3.07e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)3.07e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.606e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.109e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.109e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.109e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.109e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)2.385e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.771e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.771e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.771e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.771e-11
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)6.816e-12
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)7.331e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.644e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.435e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.644e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.644e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.176e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)4.655e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.579e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.579e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)4.861e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.181e-13