Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01168

Metabolite ID
P01168
Deionized mass
231.9758 Da
Average m/z
232.9851
Average RT
3.8113
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
121
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

121 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.072e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.024e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)7.969e-18
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)7.356e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)1.678e-11
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.802e-12
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 3Chr18:12220182–12260477 (+)8.227e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 2Chr05:32421116–32425198 (-)2.832e-13
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)6.616e-16
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)8.884e-16
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)3.316e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.884e-16
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)6.787e-13
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)2.33e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)4.928e-15
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.462e-16
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)2.488e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.072e-11
Glyma.01G018000 hypothetical protein NA 1Chr01:1736217–1737749 (-)8.653e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.144e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.178e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)1.239e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.789e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.789e-12
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)3.588e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.722e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)5.026e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.829e-14
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)3.792e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)7.547e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.624e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)4.219e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.667e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)7.517e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.032e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.032e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.516e-17
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.994e-16
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.994e-16
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.994e-16
Glyma.05G130600 hypothetical protein AT1G30040:GA2OX2:gibberellin 2-oxidase 1Chr05:32352085–32354865 (+)5.299e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)4.083e-14
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.058e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.981e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.534e-23
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.291e-18
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)5.182e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.434e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.434e-14
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.219e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.277e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)2.108e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)9.257e-12
Glyma.07G147400 hypothetical protein AT4G28010:AT4G28010:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr07:17758180–17760291 (-)5.045e-11
Glyma.08G104000 hypothetical protein NA 1Chr08:7976043–7980358 (+)1.264e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)2.504e-14
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)2.504e-14
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)5.231e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)5.231e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)1.387e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.884e-16
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)6.184e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.884e-16
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.74e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)8.122e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.397e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.377e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)3.912e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.44e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.44e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.44e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.44e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)1.763e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.885e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.885e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.885e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.885e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)6.689e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.677e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.677e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.384e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.384e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.787e-13
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)5.631e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)7.159e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.293e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)9.279e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.199e-11
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)2.33e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)6.329e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.95e-13
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.934e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)5.74e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.846e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.788e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.024e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.024e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.024e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.024e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)1.556e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)7.411e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)5.423e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)7.356e-13
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)7.356e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.584e-14
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)4.087e-12
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)2.806e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.651e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.651e-14
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.088e-13
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.752e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)1.434e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)6.147e-13
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.771e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)9.577e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)3.702e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)4.136e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)1.731e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)3.343e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)5.669e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.562e-13