Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P01158

Metabolite ID
P01158
Deionized mass
437.9718 Da
Average m/z
438.9767
Average RT
3.8075
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
81
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

81 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G243100 hypothetical protein NA 6Chr06:40417196–40434583 (-)3.188e-18
Glyma.04G096100 hypothetical protein AT1G58230:AT1G58230:binding protein 3Chr04:8566631–8625328 (+)2.592e-12
Glyma.06G242100 hypothetical protein AT3G15354:SPA3:SPA1-related 3 3Chr06:40160987–40168751 (-)3.188e-18
Glyma.06G246300 hypothetical protein NA 3Chr06:41612482–41618102 (-)3.188e-18
Glyma.06G246600 hypothetical protein AT3G15380:AT3G15380:Plasma-membrane choline transporter family protein 3Chr06:41654879–41662232 (+)3.188e-18
Glyma.06G240100 hypothetical protein AT5G53850:AT5G53850:haloacid dehalogenase-like hydrolase family protein 2Chr06:39596983–39615518 (+)3.188e-18
Glyma.06G242200 hypothetical protein NA 2Chr06:40186035–40189770 (-)3.188e-18
Glyma.06G242500 hypothetical protein NA 2Chr06:40299056–40303796 (+)3.188e-18
Glyma.06G242800 hypothetical protein AT1G53030:AT1G53030:Cytochrome C oxidase copper chaperone (COX17) 2Chr06:40392405–40396660 (+)3.188e-18
Glyma.06G244400 hypothetical protein NA 2Chr06:40797932–40799971 (-)3.188e-18
Glyma.06G244600 hypothetical protein NA 2Chr06:40941575–40943915 (+)3.188e-18
Glyma.06G247100 hypothetical protein NA 2Chr06:41695801–41699117 (-)3.188e-18
Glyma.07G237800 hypothetical protein AT4G21800:QQT2:P-loop containing nucleoside triphosphate hydrolases superfamily protein 2Chr07:41903893–41907461 (-)2.936e-14
Glyma.08G178900 hypothetical protein AT5G09410:EICBP.B:ethylene induced calmodulin binding protein 2Chr08:14334997–14346600 (-)1.072e-13
Glyma.08G179400 hypothetical protein NA 2Chr08:14384080–14390874 (+)3.083e-15
Glyma.08G180400 hypothetical protein NA 2Chr08:14441475–14446750 (-)8.373e-16
Glyma.09G223900 hypothetical protein AT3G10110:MEE67:Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein 2Chr09:44887793–44891771 (-)1.382e-12
Glyma.09G225000 hypothetical protein NA 2Chr09:44953460–44961447 (+)1.382e-12
Glyma.14G032700 hypothetical protein NA 2Chr14:2372881–2381492 (-)7.986e-18
Glyma.14G033200 hypothetical protein NA 2Chr14:2405393–2413069 (+)7.997e-50
Glyma.04G092400 hypothetical protein AT4G24620:PGI1:phosphoglucose isomerase 1 1Chr04:8143361–8148903 (-)4.035e-11
Glyma.06G240000 hypothetical protein AT2G44760:AT2G44760:dihydroorotate dehydrogenase (DUF3598) 1Chr06:39583017–39595954 (-)3.188e-18
Glyma.06G240500 hypothetical protein AT4G27500:PPI1:proton pump interactor 1 1Chr06:39689889–39696650 (-)3.188e-18
Glyma.06G240600 hypothetical protein AT4G16710:AT4G16710:glycosyltransferase family protein 28 1Chr06:39729921–39736736 (-)3.188e-18
Glyma.06G240700 hypothetical protein AT3G15350:AT3G15350:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr06:39763159–39767344 (+)3.188e-18
Glyma.06G242300 hypothetical protein NA 1Chr06:40282839–40286239 (+)3.188e-18
Glyma.06G242600 hypothetical protein AT1G53050:AT1G53050:Protein kinase superfamily protein 1Chr06:40322300–40330324 (-)3.188e-18
Glyma.06G243000 hypothetical protein NA 1Chr06:40413171–40414637 (+)3.188e-18
Glyma.06G243300 hypothetical protein NA 1Chr06:40488801–40495206 (+)3.188e-18
Glyma.06G243600 hypothetical protein NA 1Chr06:40539628–40542175 (-)3.188e-18
Glyma.06G244100 hypothetical protein NA 1Chr06:40754524–40758918 (+)3.188e-18
Glyma.06G244300 hypothetical protein NA 1Chr06:40786425–40792821 (+)3.188e-18
Glyma.06G245000 hypothetical protein NA 1Chr06:41392898–41399316 (+)3.188e-18
Glyma.06G245100 hypothetical protein AT1G53000:CKS:Nucleotide-diphospho-sugar transferases superfamily protein 1Chr06:41408336–41412693 (+)3.188e-18
Glyma.06G245200 hypothetical protein AT1G03680:THM1:thioredoxin M-type 1 1Chr06:41415611–41418860 (+)3.188e-18
Glyma.06G245600 hypothetical protein AT1G65540:LETM2:LETM1-like protein 1Chr06:41485499–41486985 (-)3.188e-18
Glyma.06G246100 hypothetical protein AT1G30760:AT1G30760:FAD-binding Berberine family protein 1Chr06:41560852–41561897 (+)3.188e-18
Glyma.06G246500 hypothetical protein NA 1Chr06:41640858–41644532 (+)3.188e-18
Glyma.06G247200 hypothetical protein NA 1Chr06:41703993–41711389 (-)3.188e-18
Glyma.06G247600 hypothetical protein NA 1Chr06:41755881–41769324 (+)6.879e-15
Glyma.07G067000 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr07:6032415–6036498 (-)1.573e-15
Glyma.07G118300 hypothetical protein AT1G80600:WIN1:HOPW1-1-interacting 1 1Chr07:13388132–13393352 (-)8.87e-11
Glyma.07G237600 hypothetical protein NA 1Chr07:41884376–41887510 (-)2.936e-14
Glyma.08G153900 hypothetical protein NA 1Chr08:11872310–11879001 (-)2.714e-11
Glyma.08G154900 hypothetical protein NA 1Chr08:11953876–11957663 (+)2.714e-11
Glyma.08G178500 hypothetical protein AT5G64240:MC3:metacaspase 3 1Chr08:14302440–14305589 (+)1.072e-13
Glyma.08G178700 hypothetical protein AT5G09420:TOC64-V:translocon at the outer membrane of chloroplasts 64-V 1Chr08:14311269–14318276 (-)1.072e-13
Glyma.08G179000 hypothetical protein NA 1Chr08:14351654–14353929 (+)3.083e-15
Glyma.08G179200 hypothetical protein AT5G09390:AT5G09390:CD2-binding protein-like protein 1Chr08:14365409–14369753 (-)3.083e-15
Glyma.08G179900 hypothetical protein AT2G22230:AT2G22230:Thioesterase superfamily protein 1Chr08:14415532–14419599 (+)3.083e-15
Glyma.09G169100 hypothetical protein AT5G22110:DPB2:DNA polymerase epsilon subunit B2 1Chr09:39370346–39372827 (+)3.78e-11
Glyma.09G218800 hypothetical protein AT4G34830:MRL1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr09:44200791–44212022 (+)1.382e-12
Glyma.09G221600 hypothetical protein NA 1Chr09:44284390–44285464 (+)5.823e-13
Glyma.09G223300 hypothetical protein AT5G55310:TOP1BETA:DNA topoisomerase 1 beta 1Chr09:44366083–44375362 (-)1.382e-12
Glyma.09G223600 hypothetical protein AT1G64860:SIGA:sigma factor A 1Chr09:44862449–44867484 (-)1.382e-12
Glyma.09G224000 hypothetical protein AT5G51430:EYE:conserved oligomeric Golgi complex component-related / COG complex component-like protein 1Chr09:44894701–44901550 (+)1.382e-12
Glyma.09G224300 hypothetical protein NA 1Chr09:44916070–44919953 (+)1.382e-12
Glyma.09G224500 hypothetical protein NA 1Chr09:44923561–44925818 (-)1.382e-12
Glyma.09G225200 hypothetical protein AT4G30890:UBP24:ubiquitin-specific protease 24 1Chr09:44977291–44982055 (-)1.382e-12
Glyma.09G225300 hypothetical protein AT5G13460:IQD11:IQ-domain 11 1Chr09:44991009–44994727 (+)1.382e-12
Glyma.10G002500 hypothetical protein AT1G02680:TAF13:TBP-associated factor 13 1Chr10:257614–262338 (-)1.017e-16
Glyma.10G012600 hypothetical protein AT4G02020:SWN:SET domain-containing protein 1Chr10:1145820–1156045 (+)3.08e-14
Glyma.10G012900 hypothetical protein AT3G62410:CP12-2:CP12 domain-containing protein 2 1Chr10:1168915–1170362 (+)3.08e-14
Glyma.10G136700 hypothetical protein NA 1Chr10:36870788–36877547 (-)1.841e-12
Glyma.11G066600 hypothetical protein AT2G18480:AT2G18480:Major facilitator superfamily protein 1Chr11:5000395–5002873 (-)5.72e-14
Glyma.12G037700 hypothetical protein NA 1Chr12:2727755–2729546 (-)2.312e-11
Glyma.12G038500 hypothetical protein NA 1Chr12:2776328–2780455 (-)1.15e-15
Glyma.12G099300 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr12:8610079–8616394 (+)4.853e-17
Glyma.12G100100 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr12:8695039–8702855 (-)4.853e-17
Glyma.14G032200 hypothetical protein NA 1Chr14:2338828–2344252 (+)4.138e-23
Glyma.14G032500 hypothetical protein NA 1Chr14:2359919–2366860 (-)9.296e-18
Glyma.14G032900 hypothetical protein AT4G23820:AT4G23820:Pectin lyase-like superfamily protein 1Chr14:2393952–2399559 (+)7.997e-50
Glyma.14G033000 hypothetical protein NA 1Chr14:2401675–2402374 (-)7.997e-50
Glyma.14G033100 hypothetical protein NA 1Chr14:2403289–2404114 (+)7.997e-50
Glyma.14G034100 hypothetical protein NA 1Chr14:2485439–2487656 (-)2e-14
Glyma.14G034200 hypothetical protein AT5G19420:AT5G19420:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein_… 1Chr14:2493571–2501952 (-)3.083e-15
Glyma.16G158200 hypothetical protein NA 1Chr16:31852226–31855963 (+)9.423e-13
Glyma.16G198600 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35958085–35960833 (+)8.782e-11
Glyma.17G164400 hypothetical protein NA 1Chr17:14719695–14721628 (+)2.453e-14
Glyma.17G164500 hypothetical protein NA 1Chr17:14748131–14750041 (+)2.453e-14
Glyma.18G099500 hypothetical protein AT1G62190:AT1G62190:Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein__AT2G22890:AT2G22890… 1Chr18:10451349–10452922 (+)1.389e-12