Overview Annotation GWAS Evidence Associated genes

P00963

Metabolite ID
P00963
Deionized mass
409.1600 Da
Average m/z
410.1654
Average RT
3.7131
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G196800 hypothetical protein NA 2Chr05:38102881–38111409 (-)2.758e-11
Glyma.05G196700 hypothetical protein AT5G08660:AT5G08660:D-lactate dehydrogenase (DUF668) 1Chr05:38092324–38100286 (+)2.758e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.409e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.409e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.404e-11
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)6.348e-11