Overview Annotation GWAS Evidence Associated genes

P00947

Metabolite ID
P00947
Deionized mass
304.1226 Da
Average m/z
305.1313
Average RT
3.7095
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G146500 hypothetical protein AT5G23670:LCB2:long chain base2 2Chr16:30737459–30743042 (+)2.426e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.939e-11
Glyma.16G146600 hypothetical protein AT1G12840:DET3:vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) 1Chr16:30744340–30749727 (+)2.426e-12
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.426e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.426e-12