Overview Annotation GWAS Evidence Associated genes

P00857

Metabolite ID
P00857
Deionized mass
306.0879 Da
Average m/z
307.0947
Average RT
3.6973
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)8.701e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.148e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.582e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.582e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.582e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.556e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.556e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.012e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.742e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)3.321e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.844e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.08e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)8.701e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.701e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.701e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)8.701e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.012e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.312e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.283e-12
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)9.602e-11
Glyma.19G002200 hypothetical protein NA 1Chr19:144515–146552 (+)1.464e-15
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.59e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.242e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.242e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)5.883e-11