Overview Annotation GWAS Evidence Associated genes

P00648

Metabolite ID
P00648
Deionized mass
100.0525 Da
Average m/z
101.0591
Average RT
3.6212
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G131200 hypothetical protein AT4G34280:AT4G34280:transducin family protein / WD-40 repeat family protein 2Chr20:37182084–37189683 (-)2.028e-12
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)1.078e-13
Glyma.07G075900 hypothetical protein AT2G45770:CPFTSY:signal recognition particle receptor protein, chloroplast (FTSY) 1Chr07:6876183–6883727 (-)2.444e-11
Glyma.18G062300 hypothetical protein AT2G29970:AT2G29970:Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein 1Chr18:5681228–5689611 (-)1.436e-12