Overview Annotation GWAS Evidence Associated genes

P00644

Metabolite ID
P00644
Deionized mass
279.9983 Da
Average m/z
281.0063
Average RT
3.6167
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G267600 hypothetical protein NA 2Chr02:45202307–45205631 (-)3.942e-13
Glyma.04G131700 hypothetical protein AT2G14120:DRP3B:dynamin related protein 2Chr04:18600348–18610726 (+)6.467e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)9.3e-14
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.154e-11
Glyma.02G267200 hypothetical protein AT1G04985:AT1G04985:triacylglycerol lipase-like protein 1Chr02:45156247–45159144 (-)2.013e-12
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)2.262e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.17e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.528e-12
Glyma.04G123800 hypothetical protein NA 1Chr04:16009828–16014505 (+)6.467e-12
Glyma.04G128600 hypothetical protein NA 1Chr04:17866415–17867698 (+)2.458e-11
Glyma.04G132100 hypothetical protein NA 1Chr04:18670288–18671611 (+)6.467e-12
Glyma.04G133100 hypothetical protein AT2G35040:AT2G35040:AICARFT/IMPCHase bienzyme family protein 1Chr04:18917456–18923836 (-)9.04e-13
Glyma.04G133600 hypothetical protein NA 1Chr04:19018474–19023018 (+)9.04e-13
Glyma.04G133700 hypothetical protein AT1G80190:PSF1:partner of SLD five 1 1Chr04:19024695–19028322 (+)9.04e-13
Glyma.04G135000 hypothetical protein AT3G12600:NUDT16:nudix hydrolase homolog 16 1Chr04:19650875–19668139 (-)9.2e-11
Glyma.04G135300 hypothetical protein AT3G06730:TRX z:Thioredoxin z 1Chr04:19936147–19943615 (-)2.753e-12
Glyma.04G135400 hypothetical protein AT3G54390:AT3G54390:sequence-specific DNA binding transcription factor 1Chr04:19962935–19966532 (-)2.753e-12
Glyma.04G135600 hypothetical protein NA 1Chr04:20171298–20173955 (+)2.753e-12
Glyma.04G158400 hypothetical protein AT3G42660:AT3G42660:transducin family protein / WD-40 repeat family protein 1Chr04:38560905–38571145 (-)1.036e-12
Glyma.04G160700 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr04:39818871–39825716 (+)1.036e-12
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)2.157e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)7.006e-11
Glyma.09G270300 hypothetical protein NA 1Chr09:48733890–48734902 (+)2.138e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.006e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.682e-14
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.154e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.154e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.951e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.79e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.417e-11