Overview Annotation GWAS Evidence Associated genes

P00628

Metabolite ID
P00628
Deionized mass
193.0306 Da
Average m/z
194.0380
Average RT
3.5822
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 2Chr10:2485817–2497071 (-)2.471e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.363e-14
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)2.315e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)4.933e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)4.359e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)3.778e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)9.548e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.52e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)3.611e-12
Glyma.06G285400 hypothetical protein AT1G06290:ACX3:acyl-CoA oxidase 3 1Chr06:47399250–47406151 (+)6.616e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)4.669e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.332e-13
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)4.669e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)4.669e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.332e-13
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)1.263e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)2.471e-14
Glyma.10G028600 hypothetical protein NA 1Chr10:2487313–2489838 (+)6.362e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)6.785e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.363e-14
Glyma.15G048800 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:3852038–3855379 (+)1.943e-13
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)1.576e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.76e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.65e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.128e-11
Glyma.19G137700 hypothetical protein NA 1Chr19:39904075–39916887 (+)3.88e-11