Overview Annotation GWAS Evidence Associated genes

P00530

Metabolite ID
P00530
Deionized mass
406.0285 Da
Average m/z
407.0344
Average RT
3.4663
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G157400 hypothetical protein AT2G33290:SUVH2:SU(VAR)3-9 homolog 2__AT4G13460:SUVH9:SU(VAR)3-9 homolog 9 1Chr07:19420715–19437950 (-)3.713e-11
Glyma.07G162300 hypothetical protein AT4G04480:AT4G04480:F-box protein with a domain protein 1Chr07:21428902–21429939 (-)3.713e-11
Glyma.07G166000 hypothetical protein NA 1Chr07:25654885–25687841 (-)3.713e-11