Overview Annotation GWAS Evidence Associated genes

P00407

Metabolite ID
P00407
Deionized mass
108.0209 Da
Average m/z
109.0273
Average RT
3.2673
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)1.733e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.245e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.979e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.283e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.642e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)6.64e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)6.64e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)6.64e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)6.64e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)6.64e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)6.64e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)6.64e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)1.733e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)8.982e-13
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)3.89e-13
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)7.105e-11
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)7.105e-11
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)7.105e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.168e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)9.866e-13
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)9.866e-13
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)2.479e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.791e-11