Overview Annotation GWAS Evidence Associated genes

P00330

Metabolite ID
P00330
Deionized mass
255.0840 Da
Average m/z
256.0890
Average RT
3.2137
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G135200 hypothetical protein NA 2Chr03:35070964–35078620 (+)3.685e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.894e-11
Glyma.01G154900 Probable carotenoid cleavage dioxygenase 4, chloroplastic AT4G19170:NCED4:nine-cis-epoxycarotenoid dioxygenase 4 1Chr01:49241723–49244645 (-)3.061e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)1.196e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.248e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.919e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.233e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.894e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.894e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.894e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.894e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.443e-15
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.443e-15
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.408e-19
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.165e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.165e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.165e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.165e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.056e-15
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)8.617e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)5.421e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)5.421e-11
Glyma.19G137700 hypothetical protein NA 1Chr19:39904075–39916887 (+)8.365e-11