Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00266

Metabolite ID
P00266
Deionized mass
320.0478 Da
Average m/z
321.0547
Average RT
3.1618
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)6.34e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.84e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.03e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.03e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.479e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.704e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.947e-17
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.232e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.325e-14
Glyma.07G040200 hypothetical protein NA 1Chr07:3324393–3329481 (-)7.722e-12
Glyma.07G255200 hypothetical protein AT3G23540:AT3G23540:alpha/beta-Hydrolases superfamily protein__AT4G14290:AT4G14290:alpha/beta-Hydrolases superfamily pr… 1Chr07:43155622–43165663 (+)1.954e-11
Glyma.07G255400 hypothetical protein AT5G19010:MPK16:mitogen-activated protein kinase 16 1Chr07:43173504–43180366 (-)1.954e-11
Glyma.07G255900 hypothetical protein AT3G23600:AT3G23600:alpha/beta-Hydrolases superfamily protein 1Chr07:43214683–43218261 (-)1.954e-11
Glyma.07G256200 hypothetical protein AT3G23580:RNR2A:ribonucleotide reductase 2A 1Chr07:43228132–43232417 (+)1.954e-11
Glyma.07G257300 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein__AT5G19090:AT5G19090:Heavy metal transport… 1Chr07:43333980–43336527 (+)1.954e-11
Glyma.09G019400 hypothetical protein AT1G55270:AT1G55270:Galactose oxidase/kelch repeat superfamily protein 1Chr09:1518046–1520807 (+)8.165e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)1.015e-12
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)7.632e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.614e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)2.752e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)3.999e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.642e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.011e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.011e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.011e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.011e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.975e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.079e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.417e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.417e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.34e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)6.727e-11
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)2.471e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.03e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.03e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.064e-13
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.063e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.249e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.442e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.249e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.249e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)9.332e-12
Glyma.16G140700 hypothetical protein NA 1Chr16:29846716–29852078 (-)2.129e-11
Glyma.16G157200 hypothetical protein AT1G71850:AT1G71850:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr16:31774664–31777363 (+)1.737e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.613e-13
Glyma.16G200500 hypothetical protein AT5G51840:AT5G51840:junctophilin-like protein 1Chr16:36163525–36167913 (-)1.227e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.496e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.606e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.606e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)2.946e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)2.005e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.659e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.795e-13