Overview Annotation GWAS Evidence Associated genes

P00190

Metabolite ID
P00190
Deionized mass
125.9924 Da
Average m/z
126.9990
Average RT
3.0967
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G231900 hypothetical protein NA 2Chr04:50037574–50041749 (-)3.865e-20
Glyma.01G133100 hypothetical protein NA 1Chr01:45283837–45295971 (-)3.024e-14
Glyma.09G184400 hypothetical protein AT1G18410:AT1G18410:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr09:40955846–40963711 (-)2.431e-12
Glyma.09G239600 hypothetical protein NA 1Chr09:46209875–46213063 (+)9.247e-11
Glyma.11G252700 hypothetical protein NA 1Chr11:34368886–34374180 (-)7.407e-20
Glyma.20G092400 hypothetical protein AT5G26600:AT5G26600:Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 1Chr20:33589031–33591099 (+)3.808e-13