Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00149

Metabolite ID
P00149
Deionized mass
142.0593 Da
Average m/z
143.0668
Average RT
3.0662
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G161500 hypothetical protein NA 5Chr16:32076715–32092322 (-)2.452e-15
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)3.033e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.155e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.155e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.065e-18
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.864e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)9.513e-13
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)9.513e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.656e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.656e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)9.868e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)9.868e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)9.868e-12
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)2.21e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)2.568e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.155e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.155e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.922e-11
Glyma.14G043800 hypothetical protein NA 1Chr14:3329698–3331556 (+)2.276e-11
Glyma.14G198800 hypothetical protein AT1G07030:AT1G07030:Mitochondrial substrate carrier family protein 1Chr14:46375963–46379746 (-)1.653e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.065e-18
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.434e-12
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)4.803e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.151e-14
Glyma.16G161000 hypothetical protein NA 1Chr16:32027849–32031609 (-)7.827e-13
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)2.876e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)1.008e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)4.274e-12