SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.20G108900

Description hypothetical protein

Gene interval Chr20:35119868–35122488 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G24175:AT4G24175:kinesin-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features544Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0055.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

544 matching features · page 35 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37602 (6R)-9,10-Dihydroxy-4,7-megastigmadien-3-one-9-O-beta-D-glucopyranoside 386.1922 15.38e-12
P37609 (25R)-spirost-6-ene-3beta-ol-5alpha,8alpha-epidioxy-3-O-alpha-l-rhamnopyranosyl-(1-4)-[alpha-l-rhamnopyranosyl-(1-2)- beta-D-glucopyranoside 898.4525 13.076e-11
P37678 (-)-2,3-Dihydrocitromycetin 292.0572 12.588e-11
P37690 Mono-trans-p-coumaroylmesotartaric acid 310.0668 14.167e-11
P37714 Sesamol 138.0311 13.467e-11
P37934 4-Methyl-umbelliferyl-N-acetyl-chitobiose 582.2049 11.769e-15
P38062 2,2'-Dinor-beta,beta-carotene-3,4,3',4'-tetrone 564.3207 15.233e-13
P38088 No candidate annotation 365.6483 12.845e-12
P38116 Leuphasyl 569.2841 18.498e-11
P38129 PGP(22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)/i-17:0) 920.4752 18.388e-12