SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.20G108900

Description hypothetical protein

Gene interval Chr20:35119868–35122488 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G24175:AT4G24175:kinesin-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features544Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0055.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

544 matching features · page 24 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28318 PS(14:1(9Z)/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 799.4284 17.972e-11
P28396 PC(2:0/20:5(6E,8Z,11Z,14Z,17Z)-OH(5)) 599.3173 11.753e-11
P28609 Methylsulfonyl 4-[(2-carbamimidoyl-3,4-dihydro-1H-isoquinolin-7-yl)oxymethyl]-1-pyridin-4-ylpiperidine-4-carboxylate 487.1867 13.566e-15
P29027 Bazzanin J 492.0855 12.791e-11
P29114 Pyrithiamine 258.1449 11.575e-13
P29279 Cyromazine 166.0980 17.153e-13
P29378 No candidate annotation 906.3320 12.659e-12
P29481 TRIPARANOL 437.2060 12.763e-11
P29491 Xylocarpin I 744.2737 11.497e-11
P29538 DG(2:0/0:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 466.2567 13.342e-11