SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.20G108900

Description hypothetical protein

Gene interval Chr20:35119868–35122488 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G24175:AT4G24175:kinesin-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features544Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0055.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

544 matching features · page 11 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13223 1,9Z,16-heptadecatrien-4,6-diyn-3,8-diol 258.1656 17.174e-11
P13327 alpha-D-GalpNAc-(1->3)-[alpha-L-Fucp-(1->2)]-D-Galp 529.2044 18.18e-11
P13641 No candidate annotation 612.0937 12.754e-14
P13915 Centhaquine 331.2032 13.265e-11
P14289 Formebolone 344.1983 12.128e-12
P14362 2',4'-Dimethylacetophenone 148.0872 11.686e-11
P14373 Syncarpamide 457.1946 17.73e-12
P14415 Lucidulinone 221.1407 11.725e-12
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 11.891e-11
P15093 2,3-Dihydro-5-(3-hydroxy-1-propenyl)-2,7-dimethoxy-3-benzofuranmethanol 266.1144 11.807e-11