SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G187900

Description hypothetical protein

Gene interval Chr19:44599748–44609219 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features163Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

163 matching features · page 12 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P33442 PGP(i-12:0/i-12:0) 690.3416 15.596e-12
P33835 Malonic acid 104.0099 11.204e-12
P34624 Acanjaposide B 924.4658 11.45e-11
P34641 beta-Ionol 194.1645 11.063e-11
P35261 valeryl 4-hydroxy valsartan 535.2720 13.844e-12
P35973 Soyasaponin aa 1054.5363 17.831e-11
P36141 3b-Hydroxy-6b-(3-chloro-2-hydroxy-2-methylbutanoyloxy)-7(11)-eremophilen-12,8b-olide 400.1684 11.689e-11
P36391 No candidate annotation 822.1200 14.882e-12
P37528 6beta-(2'-Methylbutanoyloxy)-10beta-hydroxy-8alpha-methoxyeremophil-7(11)-en-12,8beta-olide 380.2196 16.057e-12
P38254 PIP(20:1(11Z)/18:3(9,11,15)-OH(13)) 982.5184 16.379e-12