SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G026600

Description hypothetical protein

Gene interval Chr19:3303658–3312907 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G13700:PAP23:purple acid phosphatase 23

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2254Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2254

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0089.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2254 matching features · page 181 of 226

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42416 No candidate annotation 309.5464 24.09e-13
P42432 Phthalsaurediethylhexylester 306.1820 26.937e-12
P42443 (20R)-3beta-hydroxy-D:C-friedoolean-7,9(11)-dien-29-oic acid 454.3412 22.534e-13
P42503 No candidate annotation 121.9563 27.693e-11
P42536 N-Methoxyspirobrassinol 282.0505 24.63e-13
P42559 Swietmanin D 628.2486 21.417e-11
P42603 No candidate annotation 463.1322 25.469e-12
P42656 No candidate annotation 605.7500 27.585e-12
P42697 Formononetin 7-O-(6''-acetylglcoside) 472.1391 29.592e-12
P42709 Ethyl 3-(o-chlorophenyl)-5-methyl-1-phenyl-1h-pyrazole-4-carboxylate 340.0975 23.345e-11