SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G026600

Description hypothetical protein

Gene interval Chr19:3303658–3312907 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G13700:PAP23:purple acid phosphatase 23

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2254Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2254

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.0089.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2254 matching features · page 153 of 226

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P35973 Soyasaponin aa 1054.5363 23.959e-11
P35976 No candidate annotation 741.1998 26.329e-11
P36000 Saquayamycin A 820.2811 21.68e-11
P36021 Dymacrin D 438.3470 21.296e-13
P36026 O-Phosphoviomycin 765.2885 26.554e-15
P36043 No candidate annotation 300.2014 21.741e-15
P36058 Hedychilactone A 318.2178 21.352e-15
P36081 No candidate annotation 173.1252 21.739e-12
P36094 Meehanine H 825.4180 23.351e-11
P36112 Senegenin 536.2895 21.526e-11