SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G011700

Description hypothetical protein

Gene interval Chr19:1123637–1130946 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G01420:DOX1:Peroxidase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1671Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records773

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4626.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1671 matching features · page 50 of 168

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32698 No candidate annotation 229.1381 22.945e-12
P32748 R-30-hydroxygambogic acid 644.3018 22.016e-11
P32869 Diethylaminoethyl-Sephacel 378.2742 24.306e-11
P32895 PA(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z)) 766.4415 22.663e-14
P32974 No candidate annotation 499.7155 24.119e-11
P32991 Quivisianolide A 598.2398 21.353e-11
P33196 10-Deacetyltaxol-7-xyloside 943.3493 26.847e-12
P33496 No candidate annotation 435.1168 21.367e-14
P33512 Kinetensin 4-7 571.2856 28.099e-14
P33520 Midecamycin acetate 897.4690 21.444e-14