SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.18G259000

Description hypothetical protein

Gene interval Chr18:54442402–54446789 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features116Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records24

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2069.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

116 matching features · page 11 of 12

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P44193 (+)-12alpha,28-Dihydroxy-3alpha-(3'-hydroxy-3'-methylglutaryloxy)-24-methyllanosta-8,24(31)-dien-26-oic acid 646.4036 15.759e-11
P44943 Asparagoside C 740.4321 15.337e-11
P45235 L-Dihydroanticapsin 201.0968 19.27e-11
P46139 PA(5-iso PGF2VI/18:3(9Z,12Z,15Z)) 740.4302 14.216e-11
P46239 Dymacrin D 438.3476 12.658e-11
P46659 No candidate annotation 274.6919 12.39e-11
P46667 No candidate annotation 1558.8251 15.879e-11
P48907 Mangostenone A 460.1884 16.823e-11
P49661 Glypetelotine 248.0979 18.625e-11
P51702 Amifloxacin 334.1436 13.279e-11