SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.18G102500

Description hypothetical protein

Gene interval Chr18:10877529–10894945 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G06470:AT1G06470:Nucleotide/sugar transporter family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features10Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records2

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6000.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

10 matching features · page 1 of 1

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22481 p-Formylbenzoic acid 150.0319 52.368e-16
P34552 4-Methylumbelliferone 176.0458 32.807e-15
P14716 3'''-O-Methylfukugetin 570.1181 19.248e-14
P15360 p-Formylbenzoic acid 150.0308 17.43e-11
P15521 2-O-[2-O-(alpha-D-Mannopyranosyl)-alpha-D-glucopyranosyl]-3-phospho-D-glycerate 510.0973 11.268e-12
P19969 Datiscetin 286.0456 11.183e-11
P21851 Talniflumate 414.0814 13.605e-16
P23237 2-O-Feruloylhydroxycitric acid 384.0668 17.513e-11
P23268 Phosphoribosyl-formamido-carboxamide 366.0574 12.703e-11
P36395 4-Hydroxy-2-oxohexanoic acid 146.0584 14.622e-12