SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G258400

Description hypothetical protein

Gene interval Chr17:41248979–41254225 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G30755:AT1G30755:elongation factor G, putative (DUF668)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features416Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

416 matching features · page 33 of 42

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42727 Methyl syramuraldehydate 242.0783 14.108e-11
P42943 No candidate annotation 596.7469 13.136e-11
P42963 PIP(PGF1alpha/22:5(7Z,10Z,13Z,16Z,19Z)) 1064.5277 17.223e-11
P43051 5-O-Desosaminylplatenolide I 525.3250 14.504e-11
P43073 Lamtidine 344.2332 15.516e-12
P43087 LysoPE(0:0/20:3(8Z,11Z,14Z)) 503.2959 14.307e-11
P43375 PA(10:0/PGE2) 660.3651 18.624e-13
P43681 CPA(18:1(9Z)/0:0) 418.2484 16.02e-14
P43704 3'''-O-Methylfukugetin 570.1129 15.091e-11
P43802 Tetracenomycin E 408.0825 19.25e-11