SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 3 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03958 Asperpyrone A 572.1410 14.271e-11
P04040 (1R,2R)-2-Amino-1-(4-nitrophenyl)propane-1,3-diol 212.0786 13.645e-11
P04230 Finafloxacin 398.1387 14.789e-11
P04486 Impromidine 321.1760 18.744e-16
P04524 Imepitoin 279.0768 13.742e-15
P04560 17-dimethylarsinoyl-9Z-heptadecenoic acid 388.1968 13.416e-17
P04584 2-Methylacetoacetic acid 116.0478 12.184e-13
P04612 2(3H)-Furanone 84.0206 11.099e-11
P04750 Oxmetidine 399.1367 16.061e-13
P04966 Dihydroxytryptamine 192.0882 12.3e-12