SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G173000

Description hypothetical protein

Gene interval Chr16:33365497–33367017 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features150Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records2

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0133.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

150 matching features · page 5 of 15

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11373 Cysteine 121.0189 12.79e-11
P11435 4-Pyridoxolactone 165.0421 11.779e-11
P11707 Fagaramide 247.1257 12.548e-11
P13991 No candidate annotation 475.1155 19.365e-11
P14043 No candidate annotation 884.2802 12.276e-11
P14347 N-Ethyl-N-(2-hydroxy-3-sulfopropyl)-3,5-dimethoxyaniline 319.1091 12.042e-11
P14735 Dibenzo-P-dioxin 402.1788 11.72e-11
P14817 Delphinidin 3-(6-malonylglucoside)-5-glucoside 712.1486 16.969e-11
P14883 Goodyerin 776.2092 14.647e-11
P14904 Chondrochloren B 539.2688 15.681e-13